- ordered by machine, using only LSR for remaining
7/18/2018
## Running PhenoGraph... Finding nearest neighbors...DONE ~ 0.044 s ## Compute jaccard coefficient between nearest-neighbor sets...DONE ~ 0.857 s ## Build undirected graph from the weighted links...DONE ~ 0.144 s ## Run louvain clustering on the graph ...DONE ~ 0.057 s ## Return a community class ## -Modularity value: 0.8914844 ## -Number of clusters: 14 DONE!
## Running t-SNE...with seed 42 DONE
## ## FALSE TRUE ## 67 12
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4729477/
The total T cells (CD3+), helper T cells (CD3+CD4+), and total B cells (CD19+) were gated. The expression of mIgD on T and B cells was analyzed by calculating the percentages of CD3+IgD+, CD3+CD4+IgD+, immature B cells (CD19+IgM+IgD-) and mature B cells (CD19+IgD+) on a flow cytometer (model FC 500; Beckman Coulter Ltd., USA)